TOTAL_HITS
NxmlSearcher
TextBound
brat
Token
apis
TokenInterval
BratUtils
TrailingMutationPat
ReachKBKeyTransforms
TsvIMKBFactory
ReachIMKBMentionLookups
grounding
tag
Token
tbmSieves
Coref
templateReactionRegulations
Fragmenter
templateReactions
Fragmenter
text
RulerResults
Normalization
TextBound
KBEntry
KBResolution
ContextGrounding
Anaphoric
Mutant
FriesEntry
NxmlEntry
textBoundLUT
IdTracker
textColumn
ReachCSV
theKB
InMemoryKB
ReverseLookupKB
themeArgs
MentionOps
threadLimit
PaperReader
ReachCLI
toBioMention
MentionOps
toCSV
PandasOutput
toCorefMention
MentionOps
toFriesEntries
CSVParser
toJSON
JsonOutputter
FriesOutput
IndexCardOutput
toResolutions
InMemoryKB
toSingletons
Anaphoric
CorefEventMention
CorefRelationMention
CorefTextBoundMention
toString
IMKBMetaInfo
KBEntry
KBResolution
PTM
FriesEntry
NxmlDoc
NxmlEntry
toTSVrow
Row
totalSpan
TextBound
BratUtils
trackMention
AssemblyManager
trackMentions
AssemblyManager
Sieves
trackedMentions
AssemblyManager
transform
PreprocessNxml
transportWithBiochemicalReactions
Fragmenter
transports
Fragmenter
trigger
Event
trim
CSVParser
tsvIMKBFactory
ReachIMKBLookups
tsvRLKBFactory
ReachRLKBLookups
tsvRowToFields
ReachKBUtils
tsvValidateFields
ReachKBUtils
txtDir
RunNxml2Fries