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fragmenter
Fragmenter
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object Fragmenter
|
package fragmenter
class
Fragmenter
extends
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Linear Supertypes
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Fragmenter
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Instance Constructors
new
Fragmenter
(
is:
InputStream
)
Value Members
final
def
!=
(
arg0:
Any
)
:
Boolean
Definition Classes
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final
def
##
()
:
Int
Definition Classes
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final
def
==
(
arg0:
Any
)
:
Boolean
Definition Classes
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final
def
asInstanceOf
[
T0
]
:
T0
Definition Classes
Any
lazy val
biochemicalReactions
:
Set
[
BiochemicalReaction
]
lazy val
catalysis
:
Set
[
Catalysis
]
def
clone
()
:
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Attributes
protected[
java.lang
]
Definition Classes
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Annotations
@throws
(
...
)
lazy val
complexAssemblies
:
Set
[
ComplexAssembly
]
lazy val
controls
:
Set
[
Control
]
lazy val
conversions
:
Set
[
Conversion
]
lazy val
degradations
:
Set
[
Degradation
]
final
def
eq
(
arg0:
AnyRef
)
:
Boolean
Definition Classes
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def
equals
(
arg0:
Any
)
:
Boolean
Definition Classes
AnyRef → Any
def
finalize
()
:
Unit
Attributes
protected[
java.lang
]
Definition Classes
AnyRef
Annotations
@throws
(
classOf[java.lang.Throwable]
)
lazy val
geneticInteractions
:
Set
[
GeneticInteraction
]
def
getByRdfId
(
id:
String
)
:
Option
[
BioPAXElement
]
final
def
getClass
()
:
Class
[_]
Definition Classes
AnyRef → Any
def
getEntityReferenceById
(
id:
String
)
:
Set
[_ <:
EntityReference
]
def
getObjects
[
T <:
BioPAXElement
]
(
implicit
arg0:
ClassTag
[
T
]
)
:
Set
[
T
]
val
handler
:
SimpleIOHandler
def
hashCode
()
:
Int
Definition Classes
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lazy val
interactions
:
Set
[
Interaction
]
final
def
isInstanceOf
[
T0
]
:
Boolean
Definition Classes
Any
val
model
:
Model
lazy val
modulations
:
Set
[
Modulation
]
lazy val
molecularInteractions
:
Set
[
MolecularInteraction
]
final
def
ne
(
arg0:
AnyRef
)
:
Boolean
Definition Classes
AnyRef
final
def
notify
()
:
Unit
Definition Classes
AnyRef
final
def
notifyAll
()
:
Unit
Definition Classes
AnyRef
final
def
synchronized
[
T0
]
(
arg0: ⇒
T0
)
:
T0
Definition Classes
AnyRef
lazy val
templateReactionRegulations
:
Set
[
TemplateReactionRegulation
]
lazy val
templateReactions
:
Set
[
TemplateReaction
]
def
toString
()
:
String
Definition Classes
AnyRef → Any
lazy val
transportWithBiochemicalReactions
:
Set
[
TransportWithBiochemicalReaction
]
lazy val
transports
:
Set
[
Transport
]
lazy val
unificationXrefs
:
Set
[
UnificationXref
]
final
def
wait
()
:
Unit
Definition Classes
AnyRef
Annotations
@throws
(
...
)
final
def
wait
(
arg0:
Long
,
arg1:
Int
)
:
Unit
Definition Classes
AnyRef
Annotations
@throws
(
...
)
final
def
wait
(
arg0:
Long
)
:
Unit
Definition Classes
AnyRef
Annotations
@throws
(
...
)
Inherited from
AnyRef
Inherited from
Any
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