edu.arizona.sista.reach.extern.inward

ExternalKBAccessor

Related Doc: package inward

trait ExternalKBAccessor extends AnyRef

Traits and classes used to access information from external knowledge bases. Written by Tom Hicks. 3/18/2015. Last Modified: Port to odin branch: adapt for grounding scheme.

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Abstract Value Members

  1. abstract def baseURI: String

    The primary URI of the external KB (e.g., http://identifiers.org/uniprot/).

  2. abstract def namespace: String

    The namespace of the external KB (e.g., uniprot).

  3. abstract def resourceID: String

    The Resource Identifier for the primary resource location for this knowledge base (e.g., MIR:00100164).

    The Resource Identifier for the primary resource location for this knowledge base (e.g., MIR:00100164). NB: This is MIRIAM registration ID of the external knowledge base, NOT an entity ID.

Concrete Value Members

  1. final def !=(arg0: Any): Boolean

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  2. final def ##(): Int

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  3. final def ==(arg0: Any): Boolean

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  4. final def asInstanceOf[T0]: T0

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  5. def clone(): AnyRef

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  6. final def eq(arg0: AnyRef): Boolean

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  7. def equals(arg0: Any): Boolean

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  8. def finalize(): Unit

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  9. final def getClass(): Class[_]

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  10. def getLookupKey(mention: Mention): String

    Extract and return a key string, from the given Mention, which can be used to access an external knowledge base or a local object cache.

  11. def hashCode(): Int

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  12. final def isInstanceOf[T0]: Boolean

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  13. final def ne(arg0: AnyRef): Boolean

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  14. final def notify(): Unit

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  15. final def notifyAll(): Unit

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  16. def referenceURI(mention: Mention): String

    Using the given Mention, generate a URI which references an entry in the namespace of external knowledge base.

  17. def referenceURI(id: String): String

    Using the given ID string, generate a URI which references an entry in the namespace of external knowledge base (e.g., given "P2345" => "http://identifiers.org/uniprot/P2345").

  18. def resolve(mention: Mention): Map[String, String]

    Resolve the given Mention to an entry in an external knowledge base and return a map of keys and property values from that entry.

    Resolve the given Mention to an entry in an external knowledge base and return a map of keys and property values from that entry. Default method to be overridden by each child knowledge base accessor.

  19. final def synchronized[T0](arg0: ⇒ T0): T0

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  20. def toString(): String

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  21. final def wait(): Unit

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  22. final def wait(arg0: Long, arg1: Int): Unit

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  23. final def wait(arg0: Long): Unit

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