ContextEngine

abstract def assign(mentions: Seq[BioMention]): Seq[BioMention]

assigns context to mentions given current state of the engine

abstract def infer(entries: Seq[FriesEntry], documents: Seq[Document], mentionsPerEntry: Seq[Seq[BioMention]]): Unit

initializes any data structure that needs to be initialized

abstract def update(mentions: Seq[BioMention]): Unit

updates those data structures with any new info

final def !=(arg0: Any): Boolean

final def ##(): Int

final def ==(arg0: Any): Boolean

final def asInstanceOf[T0]: T0

def clone(): AnyRef

final def eq(arg0: AnyRef): Boolean

def equals(arg0: Any): Boolean

def finalize(): Unit

final def getClass(): Class[_]

def hashCode(): Int

final def isInstanceOf[T0]: Boolean

final def ne(arg0: AnyRef): Boolean

final def notify(): Unit

final def notifyAll(): Unit

final def synchronized[T0](arg0: ⇒ T0): T0

def toString(): String

final def wait(): Unit

final def wait(arg0: Long, arg1: Int): Unit

final def wait(arg0: Long): Unit